Maria Vakalopoulou

Laboratoire

Mathématiques et Informatique pour la Complexité et les Systèmes

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Publications (86)

Communication dans un congrès 16/09/2022

Test-Time Image-to-Image Translation Ensembling Improves Out-of-Distribution Generalization in Histopathology

Florent Couzinié-Devy , Maria Vakalopoulou

Communication dans un congrès 16/09/2022

Region-Guided CycleGANs for Stain Transfer in Whole Slide Images

Joseph Boyd , Irène Villa , Marie-Christine Mathieu , Eric Deutsch , Nikos Paragios , Maria Vakalopoulou , Stergios Christodoulidis

Communication dans un congrès 16/09/2022

Gigapixel Whole-Slide Images Classification Using Locally Supervised Learning

Jingwei Zhang , Xin Zhang , Ke Ma , Rajarsi Gupta , Joel Saltz , Dimitris Samaras , Maria Vakalopoulou

Article dans une revue 07/07/2022

Diversity of approaches in artificial intelligence: an opportunity for discoveries in thoracic imaging

Guillaume Chassagnon , Aliénor Campredon , Pierre-Régis Burgel , Maria Vakalopoulou

Communication dans un congrès 06/07/2022

Constrative Learning for Kidney Transplant Analysis using MRI data and Deep Convolutional Networks

Vicky Kalogeiton , Sylvain Bodard , Jean-Michel Correas , Marc-Olivier Timsit , Maria Vakalopoulou

Communication dans un congrès 01/01/2022

Unsupervised Nuclei Segmentation using Spatial Organization Priors

Marvin Lerousseau , Ingrid Garberis , Fabrice André , Stergios Christodoulidis , Maria Vakalopoulou , Hugues Talbot

Article dans une revue 01/11/2021

Deep learning for lung disease segmentation on CT: Which reconstruction kernel should be used?

Trieu-Nghi Hoang-Thi , Nikos Paragios , Marie-Pierre Revel , Guillaume Chassagnon , Maria Vakalopoulou , Stergios Christodoulidis

Article dans une revue 01/11/2021

COMBING: Clustering in Oncology for Mathematical and Biological Identification of Novel Gene Signatures

Enzo Battistella , Roger Sun , Théo Estienne , Marvin Lerousseau , Sergey Nikolaev , Emilie Alvarez Andres , Alexandre Carré , Stéphane Niyoteka , Charlotte Robert , Nikos Paragios , Emilie Alvarez Andres , Eric Deutsch , Maria Vakalopoulou

Article dans une revue 12/10/2021

Using chest CT scan and unsupervised machine learning for predicting and evaluating response to lumacaftor-ivacaftor in people with cystic fibrosis

Aliénor Campredon , Enzo Battistella , Clémence Martin , Isabelle Durieu , Laurent Mely , Christophe Marguet , Chantal Belleguic , Marlène Murris-Espin , Raphaël Chiron , Annlyse Fanton , Stéphanie Bui , Martine Reynaud-Gaubert , Philippe Reix , Trieu-Nghi Hoang-Thi , Marie-Pierre Revel , Jennifer da Silva , Pierre-Régis Burgel , Guillaume Chassagnon , Maria Vakalopoulou

Communication dans un congrès 11/10/2021

Self-Supervised Representation Learning using Visual Field Expansion on Digital Pathology

Joseph Boyd , Mykola Liashuha , Eric Deutsch , Nikos Paragios , Stergios Christodoulidis , Maria Vakalopoulou

Communication dans un congrès 27/09/2021

Deep Reinforcement Learning for L3 Slice Localization in Sarcopenia Assessment

Guillaume Chassagnon , Edouard Oyallon , Nikos Paragios , Marie-Pierre Revel , Maria Vakalopoulou

Communication dans un congrès 27/09/2021

SparseConvMIL: Sparse Convolutional Context-Aware Multiple Instance Learning for Whole Slide Image Classification

Marvin Lerousseau , Eric Deutsch , Nikos Paragios , Maria Vakalopoulou

Chapitre d'ouvrage 27/09/2021

Deep Learning for the Earth Sciences

Nikos Paragios , Maria Vakalopoulou , Stergios Christodoulidis

Communication dans un congrès 21/09/2021

Weakly Supervised Pan-Cancer Segmentation Tool

Marvin Lerousseau , Marion Classe , Enzo Battistella , Théo Estienne , Théophraste Henry , Amaury Leroy , Roger Sun , Jean-Yves Scoazec , Eric Deutsch , Nikos Paragios , Maria Vakalopoulou

Communication dans un congrès 21/09/2021

Exploring Deep Registration Latent Spaces

Théo Estienne , Enzo Battistella , Théophraste Henry , Marvin Lerousseau , Amaury Leroy , Guillaume Chassagnon , Marie-Pierre Revel , Nikos Paragios , Eric Deutsch , Maria Vakalopoulou , Stergios Christodoulidis

Communication dans un congrès 07/07/2021

Me-NDT: Neural-backed Decision Tree for visual Explainability of deep Medical models

Guanghui Fu , Ruiqian Wang , Jianqiang Li , Vicky Kalogeiton , Maria Vakalopoulou

Communication dans un congrès 25/06/2021

A Joint Spatial and Magnification Based Attention Framework for Large Scale Histopathology Classification

Jingwei Zhang , Ke Ma , John van Arman , Rajarsi Gupta , Joel Saltz , Dimitris Samaras , Maria Vakalopoulou

Article dans une revue 01/06/2021

Deep Multi-Instance Learning Using Multi-Modal Data for Diagnosis of Lymphocytosis

Pierre Sujobert , Evangelia I Zacharaki , Eugénie Maurin , Béatrice Grange , Laurent Jallades , Nikos Paragios , Maria Vakalopoulou

Communication dans un congrès 13/04/2021

3D Unsupervised Kidney Graft Segmentation Based on Deep Learning and Multi-Sequence MRI

Sylvain Bodard , Jean-Michel Correas , Marc-Olivier Timsit , Maria Vakalopoulou

Article dans une revue 29/03/2021

Unsupervised Multistep Deformable Registration of Remote Sensing Imagery Based on Deep Learning

Maria Papadomanolaki , Konstantinos Karantzalos , Stergios Christodoulidis , Maria Vakalopoulou

Article dans une revue 12/02/2021

A Deep Multi-Task Learning Framework Coupling Semantic Segmentation and Fully Convolutional LSTM Networks for Urban Change Detection

Maria Papadomanolaki , Konstantinos Karantzalos , Maria Vakalopoulou

Article dans une revue 01/01/2021

Elastic Registration–driven Deep Learning for Longitudinal Assessment of Systemic Sclerosis Interstitial Lung Disease at CT

Guillaume Chassagnon , Alexis Regent , Rafael Marini , Trieu-Nghi Hoang-Thi , Anh-Tuan Dinh-Xuan , Bertrand Dunogué , Luc Mouthon , Nikos Paragios , Marie-Pierre Revel , Maria Vakalopoulou

Article dans une revue 01/01/2021

AI-driven quantification, staging and outcome prediction of COVID-19 pneumonia

Guillaume Chassagnon , Enzo Battistella , Trieu-Nghi Hoang-Thi , Severine Dangeard , Eric Deutsch , Fabrice André , Enora Guillo , Nara Halm , Stefany El Hajj , Florian Bompard , Sophie Neveu , Chahinez Hani , Ines Saab , Aliénor Campredon , Hasmik Koulakian , Souhail Bennani , Gael Freche , Maxime Barat , Maria Vakalopoulou , Stergios Christodoulidis

Article dans une revue 13/11/2020

Radiomics to predict outcomes and abscopal response of patients with cancer treated with immunotherapy combined with radiotherapy using a validated signature of CD8 cells

Roger Sun , Nora Sundahl , Markus Hecht , Florian Putz , Andrea Lancia , Angela Rouyar , Marina Milic , Alexandre Carré , Enzo Battistella , Emilie Alvarez Andres , Stéphane Niyoteka , Edouard Romano , Guillaume Louvel , Jérôme Durand-Labrunie , Sophie Bockel , Rastilav Bahleda , Charlotte Robert , Celine Boutros , Nikos Paragios , Maria Vakalopoulou

19/10/2020

Deep learning based registration using spatial gradients and noisy segmentation labels

Théo Estienne , Enzo Battistella , Alexandre Carré , Théophraste Henry , Marvin Lerousseau , Charlotte Robert , Nikos Paragios , Eric Deutsch , Maria Vakalopoulou

Communication dans un congrès 29/09/2020

Weakly Supervised Multiple Instance Learning Histopathological Tumor Segmentation

Marvin Lerousseau , Marion Classe , Julien Adam , Enzo Battistella , Alexandre Carré , Théo Estienne , Théophraste Henry , Eric Deutsch , Nikos Paragios , Maria Vakalopoulou

Communication dans un congrès 29/09/2020

Self-supervised Nuclei Segmentation in Histopathological Images Using Attention

Roberto Salgado , Stefan Michiels , Sherene Loi , Fabrice André , Nikos Paragios , Stergios Christodoulidis , Maria Vakalopoulou

Article dans une revue 23/07/2020

Standardization of brain MR images across machines and protocols: bridging the gap for MRI-based radiomics

Alexandre Carré , Guillaume Klausner , Myriam Edjlali , Marvin Lerousseau , Jade Briend-Diop , Roger Sun , Samy Ammari , Sylvain Reuze , Emilie Alvarez Andres , Théo Estienne , Stéphane Niyoteka , Enzo Battistella , Frédéric Dhermain , Nikos Paragios , Eric Deutsch , Catherine Oppenheim , Johan Pallud , Charlotte Robert , Maria Vakalopoulou

Article dans une revue 01/07/2020

Deep Learning–based Approach for Automated Assessment of Interstitial Lung Disease in Systemic Sclerosis on CT Images

Guillaume Chassagnon , Alexis Regent , Evangelia Zacharaki , Galit Aviram , Charlotte Martin , Rafael Marini , Norbert Bus , Naïm Jerjir , Arsène Mekinian , Thông Hua-Huy , Laurence Monnier-Cholley , Nouria Benmostefa , Luc Mouthon , Anh-Tuan Dinh-Xuan , Nikos Paragios , Marie-Pierre Revel , Maria Vakalopoulou

Article dans une revue 20/03/2020

Deep Learning-Based Concurrent Brain Registration and Tumor Segmentation

Théo Estienne , Marvin Lerousseau , Emilie Alvarez Andres , Enzo Battistella , Alexandre Carré , Siddhartha Chandra , Roger Sun , Charlotte Robert , Nikos Paragios , Eric Deutsch , Maria Vakalopoulou , Stergios Christodoulidis , Hugues Talbot